Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK2O00526 KRT8P10-201ENST00000450021 1447 ntBASIC13.94□□□□□ -0.18
UPK2O00526 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
UPK2O00526 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK2O00526 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.94□□□□□ -0.18
UPK2O00526 RN7SL850P-201ENST00000579959 291 ntBASIC13.94□□□□□ -0.18
UPK2O00526 STK25P1-201ENST00000585406 838 ntBASIC13.94□□□□□ -0.18
UPK2O00526 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK2O00526 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.94□□□□□ -0.18
UPK2O00526 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
UPK2O00526 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.94□□□□□ -0.18
UPK2O00526 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
UPK2O00526 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
UPK2O00526 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
UPK2O00526 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 AC105020.1-201ENST00000435356 2205 ntBASIC13.94□□□□□ -0.18
UPK2O00526 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 AC092053.1-201ENST00000605787 1936 ntBASIC13.94□□□□□ -0.18
UPK2O00526 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
UPK2O00526 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
UPK2O00526 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
UPK2O00526 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UPK2O00526 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 AC005915.1-201ENST00000624912 2018 ntBASIC13.93□□□□□ -0.18
UPK2O00526 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
UPK2O00526 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 AGGF1P2-201ENST00000426656 2106 ntBASIC13.93□□□□□ -0.18
UPK2O00526 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
UPK2O00526 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
UPK2O00526 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 AC246785.2-201ENST00000432512 513 ntBASIC13.93□□□□□ -0.18
UPK2O00526 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK2O00526 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 MEG3-211ENST00000452514 461 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK2O00526 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.93□□□□□ -0.18
UPK2O00526 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
UPK2O00526 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK2O00526 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.93□□□□□ -0.18
UPK2O00526 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
UPK2O00526 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.93□□□□□ -0.18
UPK2O00526 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK2O00526 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UPK2O00526 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.92□□□□□ -0.18
UPK2O00526 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.92□□□□□ -0.18
UPK2O00526 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
UPK2O00526 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
UPK2O00526 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.92□□□□□ -0.18
UPK2O00526 RCN1P1-201ENST00000400413 996 ntBASIC13.92□□□□□ -0.18
UPK2O00526 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.92□□□□□ -0.18
UPK2O00526 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.92□□□□□ -0.18
UPK2O00526 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
UPK2O00526 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms