Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCDC188H7C350 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC188H7C350 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CCDC188H7C350 AL162727.3-201ENST00000635661 2787 ntBASIC18.07■□□□□ 0.48
CCDC188H7C350 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CCDC188H7C350 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC188H7C350 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC188H7C350 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC188H7C350 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC188H7C350 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCDC188H7C350 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC188H7C350 SNORA78-201ENST00000459373 127 ntBASIC18.07■□□□□ 0.48
CCDC188H7C350 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC188H7C350 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC188H7C350 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC188H7C350 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 AC019129.2-201ENST00000609837 1235 ntBASIC18.07■□□□□ 0.48
CCDC188H7C350 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC188H7C350 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC188H7C350 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC188H7C350 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC188H7C350 AL391005.1-201ENST00000623953 2435 ntBASIC18.07■□□□□ 0.48
CCDC188H7C350 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC188H7C350 AC092171.3-201ENST00000610122 2651 ntBASIC18.06■□□□□ 0.48
CCDC188H7C350 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC188H7C350 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC188H7C350 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC188H7C350 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC188H7C350 AL138966.2-201ENST00000621997 464 ntBASIC18.06■□□□□ 0.48
CCDC188H7C350 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC188H7C350 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC188H7C350 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC188H7C350 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC188H7C350 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC188H7C350 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC188H7C350 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC188H7C350 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 FAM8A6P-201ENST00000407496 1135 ntBASIC18.05■□□□□ 0.48
CCDC188H7C350 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 AP003733.1-201ENST00000491725 852 ntBASIC18.05■□□□□ 0.48
CCDC188H7C350 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CCDC188H7C350 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
CCDC188H7C350 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.05■□□□□ 0.48
CCDC188H7C350 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
CCDC188H7C350 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC188H7C350 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC188H7C350 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC188H7C350 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms