Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 TSPY9P-201ENST00000440215 945 ntBASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 TSPY11P-201ENST00000442607 1045 ntBASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 AC107918.4-201ENST00000641966 3141 ntBASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 KRT8P33-201ENST00000508125 1423 ntBASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 AL513523.2-202ENST00000427283 2040 ntBASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC9.63□□□□□ -0.87
CHKB-CPT1BH3BT56 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 AP003680.1-201ENST00000598970 3660 ntBASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 PTCHD3P2-201ENST00000424937 1205 ntBASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 SRD5A1P1-201ENST00000442297 786 ntBASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 MNT-208ENST00000575394 606 ntTSL 4 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 AL358852.1-201ENST00000623174 1268 ntBASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
CHKB-CPT1BH3BT56 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms