Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 AC104390.1-201ENST00000555663 520 ntBASIC12.74□□□□□ -0.37
SMKR1H3BMG3 AF186192.3-201ENST00000583427 947 ntBASIC12.74□□□□□ -0.37
SMKR1H3BMG3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 CR769767.2-201ENST00000622735 460 ntBASIC12.74□□□□□ -0.37
SMKR1H3BMG3 AC112497.1-201ENST00000624824 639 ntBASIC12.74□□□□□ -0.37
SMKR1H3BMG3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SMKR1H3BMG3 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.73□□□□□ -0.37
SMKR1H3BMG3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 DDX43P3-201ENST00000441064 443 ntBASIC12.73□□□□□ -0.37
SMKR1H3BMG3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 LINC02012-201ENST00000608206 1725 ntBASIC12.73□□□□□ -0.37
SMKR1H3BMG3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SMKR1H3BMG3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
SMKR1H3BMG3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms