Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 AC069335.1-201ENST00000489972 472 ntBASIC16.92■□□□□ 0.3
C4orf47A7E2U8 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 FAM86C2P-203ENST00000528684 1004 ntBASIC16.92■□□□□ 0.3
C4orf47A7E2U8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 HCG11-201ENST00000411553 5696 ntBASIC16.92■□□□□ 0.3
C4orf47A7E2U8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 AC093010.1-201ENST00000473625 1624 ntBASIC16.92■□□□□ 0.3
C4orf47A7E2U8 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
C4orf47A7E2U8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 AC009336.1-201ENST00000608941 1553 ntBASIC16.91■□□□□ 0.3
C4orf47A7E2U8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 AL355306.1-201ENST00000415580 579 ntBASIC16.91■□□□□ 0.3
C4orf47A7E2U8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 KLF2P3-201ENST00000451977 1087 ntBASIC16.91■□□□□ 0.3
C4orf47A7E2U8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 DUTP2-201ENST00000519164 463 ntBASIC16.91■□□□□ 0.3
C4orf47A7E2U8 IGHV3-52-201ENST00000519770 353 ntBASIC16.91■□□□□ 0.3
C4orf47A7E2U8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 AC008761.3-201ENST00000624803 892 ntBASIC16.91■□□□□ 0.3
C4orf47A7E2U8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 AC020763.4-201ENST00000623414 4170 ntBASIC16.91■□□□□ 0.3
C4orf47A7E2U8 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
C4orf47A7E2U8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 AC018470.1-201ENST00000624790 3129 ntBASIC16.9■□□□□ 0.3
C4orf47A7E2U8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 KRT18P32-201ENST00000424695 1287 ntBASIC16.9■□□□□ 0.3
C4orf47A7E2U8 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.9■□□□□ 0.3
C4orf47A7E2U8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms