Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 FGFR3P6-201ENST00000457012 610 ntBASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 NKAPP1-205ENST00000585790 367 ntBASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CCDC196A0A1B0GTZ2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC196A0A1B0GTZ2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 UNC93B7-201ENST00000509439 705 ntBASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 AF238378.1-201ENST00000526806 358 ntBASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 AC097637.2-201ENST00000624096 1997 ntBASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.17■□□□□ 0.82
CCDC196A0A1B0GTZ2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 AL450487.1-201ENST00000426799 995 ntBASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 BX005266.1-201ENST00000473402 457 ntBASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CCDC196A0A1B0GTZ2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CCDC196A0A1B0GTZ2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms