Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF103-CHMP3A0A140T963 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 AL162727.3-201ENST00000635661 2787 ntBASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC008741.2-201ENST00000612792 3115 ntBASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 STARP1-201ENST00000397973 869 ntBASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 BX664615.1-201ENST00000443558 458 ntBASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 YBX1P2-201ENST00000489612 999 ntBASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC139887.4-201ENST00000607877 719 ntBASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 AGGF1P2-201ENST00000426656 2106 ntBASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 LINC00304-203ENST00000565008 1864 ntBASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF103-CHMP3A0A140T963 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 DOC2GP-204ENST00000639052 2548 ntBASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 KRT8P47-201ENST00000604727 1398 ntBASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 FAM8A6P-201ENST00000407496 1135 ntBASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC012306.2-201ENST00000609350 630 ntBASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC004263.2-201ENST00000617183 678 ntBASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 AC097493.4-201ENST00000641197 219 ntBASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RNF103-CHMP3A0A140T963 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF103-CHMP3A0A140T963 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF103-CHMP3A0A140T963 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF103-CHMP3A0A140T963 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
RNF103-CHMP3A0A140T963 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.77■□□□□ 0.27
RNF103-CHMP3A0A140T963 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RNF103-CHMP3A0A140T963 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RNF103-CHMP3A0A140T963 AC063926.3-201ENST00000624734 5658 ntBASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RNF103-CHMP3A0A140T963 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms