Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 ARMC10P1-201ENST00000313754 855 ntBASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 AC007967.3-201ENST00000434308 558 ntBASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 IGHV3-52-201ENST00000519770 353 ntBASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 BANP-227ENST00000626016 2144 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.64□□□□□ -0.39
TRGV1A0A0A0MS02 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 COX5BP2-201ENST00000392354 334 ntBASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 KRT18P35-201ENST00000510488 1269 ntBASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 AC116407.4-201ENST00000623319 1061 ntBASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 AC016734.2-201ENST00000624325 1377 ntBASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 AL645608.8-201ENST00000606034 2086 ntBASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRGV1A0A0A0MS02 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AC125634.1-201ENST00000438758 1403 ntBASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.62□□□□□ -0.39
TRGV1A0A0A0MS02 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms