Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 IGHV3-47-201ENST00000425060 335 ntBASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 STK19B-204ENST00000512515 211 ntBASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 BNIP3P18-201ENST00000593976 575 ntBASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 AL358472.4-201ENST00000633140 710 ntBASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 AC009336.1-201ENST00000608941 1553 ntBASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 AC132938.5-201ENST00000624980 1813 ntBASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CYP46A1Q9Y6A2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 AC011676.5-201ENST00000624864 2660 ntBASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 INTS4P1-201ENST00000438455 1935 ntBASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 MIR3180-1-201ENST00000580374 94 ntBASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 MIR3180-3-201ENST00000584616 94 ntBASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CYP46A1Q9Y6A2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 AC003669.1-201ENST00000334569 611 ntBASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 KRT18P35-201ENST00000510488 1269 ntBASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 AC096582.2-201ENST00000510860 516 ntBASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 AC092053.1-201ENST00000605787 1936 ntBASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 AL135999.2-201ENST00000622438 1686 ntBASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CYP46A1Q9Y6A2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CYP46A1Q9Y6A2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms