Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 SPDYE22P-201ENST00000582158 798 ntBASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 FOXO1B-201ENST00000504678 1527 ntBASIC25.94■■□□□ 1.74
CDC42BPBQ9Y5S2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 AC244107.1-201ENST00000442033 332 ntBASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC25.93■■□□□ 1.74
CDC42BPBQ9Y5S2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 HCG4-201ENST00000418983 998 ntBASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 GAPDHP21-201ENST00000450301 1010 ntBASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPBQ9Y5S2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 INGX-202ENST00000489074 768 ntBASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 AC008267.7-201ENST00000624570 1194 ntBASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 IGHV3-42-201ENST00000520410 361 ntBASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC25.91■■□□□ 1.74
CDC42BPBQ9Y5S2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 AC100757.3-201ENST00000622361 1406 ntBASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 SATB1-217ENST00000493952 626 ntTSL 3 BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 SERBP1P5-201ENST00000510079 1181 ntBASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPBQ9Y5S2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC25.89■■□□□ 1.74
CDC42BPBQ9Y5S2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPBQ9Y5S2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPBQ9Y5S2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
CDC42BPBQ9Y5S2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
CDC42BPBQ9Y5S2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC25.89■■□□□ 1.73
CDC42BPBQ9Y5S2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 AC027307.2-201ENST00000591252 911 ntBASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CDC42BPBQ9Y5S2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms