Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 SCARNA2-201ENST00000458748 420 ntBASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 SART3-203ENST00000546611 1184 ntBASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAI2Q9Y5P3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RAI2Q9Y5P3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 MIR940-201ENST00000401276 94 ntBASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 AC064862.7-201ENST00000604520 867 ntBASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 TP73-AS1-207ENST00000624167 988 ntBASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RAI2Q9Y5P3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 AL022326.1-202ENST00000641533 845 ntBASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 CROCCP2-202ENST00000412962 2773 ntBASIC17.57■□□□□ 0.4
RAI2Q9Y5P3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 AL135999.2-201ENST00000622438 1686 ntBASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 PRYP5-201ENST00000451909 266 ntBASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.56■□□□□ 0.4
RAI2Q9Y5P3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms