Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
PCDHB1Q9Y5F3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 SCARNA2-201ENST00000458748 420 ntBASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 AC109462.3-201ENST00000573934 613 ntBASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 AC139713.2-201ENST00000641328 2723 ntBASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB1Q9Y5F3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 RBM17P3-201ENST00000417687 1192 ntBASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 AL645608.8-201ENST00000606034 2086 ntBASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHB1Q9Y5F3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 CROCCP2-202ENST00000412962 2773 ntBASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB1Q9Y5F3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms