Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS9D1Q9Y2B5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS9D1Q9Y2B5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
VPS9D1Q9Y2B5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS9D1Q9Y2B5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS9D1Q9Y2B5 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS9D1Q9Y2B5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VPS9D1Q9Y2B5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 AC026790.2-201ENST00000606282 430 ntBASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 TMEM14EP-202ENST00000639378 1296 ntBASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 AC093525.9-201ENST00000624961 1746 ntBASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VPS9D1Q9Y2B5 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 AC073592.5-201ENST00000624854 528 ntBASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS9D1Q9Y2B5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 AC010326.4-201ENST00000604665 891 ntBASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS9D1Q9Y2B5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms