Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDE1Q9NXR1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 KRT18P29-201ENST00000397031 1267 ntBASIC16.87■□□□□ 0.29
NDE1Q9NXR1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 AC005052.1-201ENST00000625181 2492 ntBASIC16.87■□□□□ 0.29
NDE1Q9NXR1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.87■□□□□ 0.29
NDE1Q9NXR1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 AC116562.2-201ENST00000507042 360 ntBASIC16.86■□□□□ 0.29
NDE1Q9NXR1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDE1Q9NXR1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms