Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF2Q9HAU5 PCDH8P1-201ENST00000428983 2773 ntBASIC21.36■■□□□ 1.01
UPF2Q9HAU5 FLJ16779-201ENST00000612722 7638 ntBASIC21.36■■□□□ 1.01
UPF2Q9HAU5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 AC046185.3-201ENST00000623228 1824 ntBASIC21.36■■□□□ 1.01
UPF2Q9HAU5 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 AC112698.1-201ENST00000510299 916 ntBASIC21.36■■□□□ 1.01
UPF2Q9HAU5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 Z99916.2-201ENST00000604037 246 ntBASIC21.36■■□□□ 1.01
UPF2Q9HAU5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPF2Q9HAU5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 AC034232.1-201ENST00000506026 1064 ntBASIC21.35■■□□□ 1.01
UPF2Q9HAU5 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UPF2Q9HAU5 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 MIR718-201ENST00000390190 70 ntBASIC21.34■■□□□ 1.01
UPF2Q9HAU5 TSPY12P-201ENST00000421279 868 ntBASIC21.34■■□□□ 1.01
UPF2Q9HAU5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 TSPY20P-201ENST00000450910 630 ntBASIC21.34■■□□□ 1.01
UPF2Q9HAU5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 AC093525.9-201ENST00000624961 1746 ntBASIC21.34■■□□□ 1.01
UPF2Q9HAU5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
UPF2Q9HAU5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UPF2Q9HAU5 INGX-201ENST00000359239 846 ntBASIC21.33■■□□□ 1.01
UPF2Q9HAU5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms