Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.22■□□□□ 0.83
SH2D4AQ9H788 PI4KAP1-204ENST00000612579 1703 ntBASIC20.22■□□□□ 0.83
SH2D4AQ9H788 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 AL135999.2-201ENST00000622438 1686 ntBASIC20.21■□□□□ 0.83
SH2D4AQ9H788 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 AL590787.1-201ENST00000568856 1315 ntBASIC20.21■□□□□ 0.83
SH2D4AQ9H788 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4AQ9H788 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.83
SH2D4AQ9H788 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.2■□□□□ 0.83
SH2D4AQ9H788 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 IGLL3P-201ENST00000412472 434 ntBASIC20.2■□□□□ 0.82
SH2D4AQ9H788 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 AC096734.2-201ENST00000562054 433 ntBASIC20.2■□□□□ 0.82
SH2D4AQ9H788 AC018845.2-201ENST00000568326 409 ntBASIC20.2■□□□□ 0.82
SH2D4AQ9H788 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 HTR7P1-202ENST00000624664 4411 ntBASIC20.2■□□□□ 0.82
SH2D4AQ9H788 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4AQ9H788 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 AC005829.1-201ENST00000570002 483 ntBASIC20.19■□□□□ 0.82
SH2D4AQ9H788 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4AQ9H788 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms