Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
NELFAQ9H3P2 AL023806.1-201ENST00000603994 1649 ntBASIC15.52■□□□□ 0.08
NELFAQ9H3P2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFAQ9H3P2 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
NELFAQ9H3P2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NELFAQ9H3P2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.52■□□□□ 0.07
NELFAQ9H3P2 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.52■□□□□ 0.07
NELFAQ9H3P2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NELFAQ9H3P2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFAQ9H3P2 AC139713.2-201ENST00000641328 2723 ntBASIC15.52■□□□□ 0.07
NELFAQ9H3P2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NELFAQ9H3P2 AC141586.5-201ENST00000624546 2050 ntBASIC15.52■□□□□ 0.07
NELFAQ9H3P2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 FAM220CP-201ENST00000395253 831 ntBASIC15.51■□□□□ 0.07
NELFAQ9H3P2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 AC122714.2-201ENST00000502787 707 ntBASIC15.51■□□□□ 0.07
NELFAQ9H3P2 UNC93B7-201ENST00000509439 705 ntBASIC15.51■□□□□ 0.07
NELFAQ9H3P2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 MIR5100-201ENST00000579544 119 ntBASIC15.51■□□□□ 0.07
NELFAQ9H3P2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NELFAQ9H3P2 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 MYCLP1-201ENST00000372451 1075 ntBASIC15.5■□□□□ 0.07
NELFAQ9H3P2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 AC103564.2-201ENST00000432853 1299 ntBASIC15.5■□□□□ 0.07
NELFAQ9H3P2 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 KRT16P4-201ENST00000453883 522 ntBASIC15.5■□□□□ 0.07
NELFAQ9H3P2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 AL121772.3-201ENST00000610840 674 ntBASIC15.5■□□□□ 0.07
NELFAQ9H3P2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.5■□□□□ 0.07
NELFAQ9H3P2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms