Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
STRADBQ9C0K7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.44■□□□□ 0.22
STRADBQ9C0K7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.44■□□□□ 0.22
STRADBQ9C0K7 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 AL135999.2-201ENST00000622438 1686 ntBASIC16.43■□□□□ 0.22
STRADBQ9C0K7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 AC023141.5-201ENST00000458585 616 ntBASIC16.43■□□□□ 0.22
STRADBQ9C0K7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 FAM86C2P-203ENST00000528684 1004 ntBASIC16.43■□□□□ 0.22
STRADBQ9C0K7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 AC006116.8-202ENST00000587620 1550 ntBASIC16.43■□□□□ 0.22
STRADBQ9C0K7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
STRADBQ9C0K7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 PAWRP1-201ENST00000451083 565 ntBASIC16.42■□□□□ 0.22
STRADBQ9C0K7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 AC022145.2-201ENST00000598203 171 ntBASIC16.42■□□□□ 0.22
STRADBQ9C0K7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
STRADBQ9C0K7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 AP000974.1-201ENST00000623909 2387 ntBASIC16.41■□□□□ 0.22
STRADBQ9C0K7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 AL139400.1-201ENST00000366220 510 ntBASIC16.41■□□□□ 0.22
STRADBQ9C0K7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 FAM86GP-201ENST00000448322 971 ntBASIC16.41■□□□□ 0.22
STRADBQ9C0K7 HLA-J-203ENST00000494367 1087 ntBASIC16.41■□□□□ 0.22
STRADBQ9C0K7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
STRADBQ9C0K7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms