Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 AC055876.3-201ENST00000431496 288 ntBASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 AL009183.1-201ENST00000603760 355 ntBASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 AC138649.4-201ENST00000612222 287 ntBASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 TUBB3P1-201ENST00000405796 1332 ntBASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 LYSMD4-203ENST00000378904 2122 ntBASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDH11XQ9BZA7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDH11XQ9BZA7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDH11XQ9BZA7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PCDH11XQ9BZA7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 BASP1P1-201ENST00000430708 665 ntBASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 RBPMS2P1-201ENST00000437762 623 ntBASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 AC125807.1-201ENST00000483097 614 ntBASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 INGX-202ENST00000489074 768 ntBASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 AC109635.5-201ENST00000533593 962 ntBASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PCDH11XQ9BZA7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 MIR943-201ENST00000401286 94 ntBASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AC107890.1-201ENST00000422478 521 ntBASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDH11XQ9BZA7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms