Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VGLL1Q99990 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.22□□□□□ -0.29
VGLL1Q99990 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.22□□□□□ -0.29
VGLL1Q99990 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.22□□□□□ -0.29
VGLL1Q99990 AC140113.3-201ENST00000605663 199 ntBASIC13.22□□□□□ -0.29
VGLL1Q99990 AL138966.2-201ENST00000621997 464 ntBASIC13.22□□□□□ -0.29
VGLL1Q99990 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
VGLL1Q99990 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
VGLL1Q99990 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.22□□□□□ -0.29
VGLL1Q99990 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VGLL1Q99990 LINC01311-201ENST00000565162 1445 ntBASIC13.22□□□□□ -0.29
VGLL1Q99990 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.21□□□□□ -0.29
VGLL1Q99990 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
VGLL1Q99990 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.21□□□□□ -0.29
VGLL1Q99990 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
VGLL1Q99990 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
VGLL1Q99990 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
VGLL1Q99990 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VGLL1Q99990 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VGLL1Q99990 AC005104.2-201ENST00000427818 678 ntBASIC13.21□□□□□ -0.29
VGLL1Q99990 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
VGLL1Q99990 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.21□□□□□ -0.29
VGLL1Q99990 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.21□□□□□ -0.29
VGLL1Q99990 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.21□□□□□ -0.29
VGLL1Q99990 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.21□□□□□ -0.29
VGLL1Q99990 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
VGLL1Q99990 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VGLL1Q99990 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.21□□□□□ -0.29
VGLL1Q99990 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.21□□□□□ -0.3
VGLL1Q99990 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
VGLL1Q99990 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.21□□□□□ -0.3
VGLL1Q99990 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.21□□□□□ -0.3
VGLL1Q99990 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VGLL1Q99990 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.21□□□□□ -0.3
VGLL1Q99990 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VGLL1Q99990 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.3
VGLL1Q99990 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VGLL1Q99990 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
VGLL1Q99990 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VGLL1Q99990 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.21□□□□□ -0.3
VGLL1Q99990 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
VGLL1Q99990 PCDHA14-201ENST00000506751 2298 ntBASIC13.2□□□□□ -0.3
VGLL1Q99990 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
VGLL1Q99990 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VGLL1Q99990 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.2□□□□□ -0.3
VGLL1Q99990 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.2□□□□□ -0.3
VGLL1Q99990 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
VGLL1Q99990 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.2□□□□□ -0.3
VGLL1Q99990 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms