Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PKP4Q99569 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PKP4Q99569 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 AC079776.2-201ENST00000641154 1609 ntBASIC16.92■□□□□ 0.3
PKP4Q99569 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.92■□□□□ 0.3
PKP4Q99569 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.92■□□□□ 0.3
PKP4Q99569 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 AL135999.2-201ENST00000622438 1686 ntBASIC16.92■□□□□ 0.3
PKP4Q99569 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PKP4Q99569 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.92■□□□□ 0.3
PKP4Q99569 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.92■□□□□ 0.3
PKP4Q99569 RBM17P3-201ENST00000417687 1192 ntBASIC16.92■□□□□ 0.3
PKP4Q99569 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.92■□□□□ 0.3
PKP4Q99569 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PKP4Q99569 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PKP4Q99569 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.92■□□□□ 0.3
PKP4Q99569 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
PKP4Q99569 MTDHP3-201ENST00000594186 672 ntBASIC16.92■□□□□ 0.3
PKP4Q99569 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 REXO1L6P-202ENST00000619970 1078 ntBASIC16.92■□□□□ 0.3
PKP4Q99569 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PKP4Q99569 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.92■□□□□ 0.3
PKP4Q99569 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.92■□□□□ 0.3
PKP4Q99569 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.92■□□□□ 0.3
PKP4Q99569 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.92■□□□□ 0.3
PKP4Q99569 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.92■□□□□ 0.3
PKP4Q99569 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PKP4Q99569 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PKP4Q99569 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.91■□□□□ 0.3
PKP4Q99569 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 AC012313.1-201ENST00000593393 3059 ntBASIC16.91■□□□□ 0.3
PKP4Q99569 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 AC106820.2-201ENST00000563775 3264 ntBASIC16.91■□□□□ 0.3
PKP4Q99569 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PKP4Q99569 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.91■□□□□ 0.3
PKP4Q99569 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PKP4Q99569 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.91■□□□□ 0.3
PKP4Q99569 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.91■□□□□ 0.3
PKP4Q99569 SIGLEC30P-201ENST00000455569 941 ntBASIC16.91■□□□□ 0.3
PKP4Q99569 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 AC073592.4-201ENST00000623827 446 ntBASIC16.91■□□□□ 0.3
PKP4Q99569 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PKP4Q99569 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.91■□□□□ 0.3
PKP4Q99569 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 AC004817.3-201ENST00000602957 2129 ntBASIC16.91■□□□□ 0.3
PKP4Q99569 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PKP4Q99569 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PKP4Q99569 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PKP4Q99569 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.91■□□□□ 0.3
PKP4Q99569 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
PKP4Q99569 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PKP4Q99569 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.9■□□□□ 0.3
PKP4Q99569 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PKP4Q99569 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms