Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AC079776.2-201ENST00000641154 1609 ntBASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 SIGLEC30P-201ENST00000455569 941 ntBASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG4P5Q96PW8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 CLEC4GP1-201ENST00000596555 870 ntBASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 AC012313.10-201ENST00000623509 926 ntBASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG4P5Q96PW8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CSPG4P5Q96PW8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CSPG4P5Q96PW8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CSPG4P5Q96PW8 AC060834.1-201ENST00000443027 2032 ntBASIC17.89■□□□□ 0.46
CSPG4P5Q96PW8 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CSPG4P5Q96PW8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 AC091304.2-201ENST00000564639 760 ntBASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CSPG4P5Q96PW8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CSPG4P5Q96PW8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.88■□□□□ 0.45
CSPG4P5Q96PW8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms