Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALR3Q96L12 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALR3Q96L12 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CALR3Q96L12 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CALR3Q96L12 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CALR3Q96L12 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.4■□□□□ 0.54
CALR3Q96L12 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CALR3Q96L12 AC112907.2-201ENST00000448639 330 ntBASIC18.4■□□□□ 0.54
CALR3Q96L12 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.4■□□□□ 0.54
CALR3Q96L12 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.4■□□□□ 0.54
CALR3Q96L12 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.4■□□□□ 0.54
CALR3Q96L12 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.4■□□□□ 0.54
CALR3Q96L12 AC109462.3-201ENST00000573934 613 ntBASIC18.4■□□□□ 0.54
CALR3Q96L12 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.4■□□□□ 0.54
CALR3Q96L12 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.4■□□□□ 0.54
CALR3Q96L12 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.4■□□□□ 0.54
CALR3Q96L12 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.4■□□□□ 0.54
CALR3Q96L12 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CALR3Q96L12 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.4■□□□□ 0.54
CALR3Q96L12 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CALR3Q96L12 AC125634.1-201ENST00000438758 1403 ntBASIC18.4■□□□□ 0.54
CALR3Q96L12 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.39■□□□□ 0.54
CALR3Q96L12 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
CALR3Q96L12 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CALR3Q96L12 UBALD1-205ENST00000590891 2641 ntBASIC18.39■□□□□ 0.54
CALR3Q96L12 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CALR3Q96L12 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CALR3Q96L12 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CALR3Q96L12 CICP6-201ENST00000457191 2729 ntBASIC18.39■□□□□ 0.53
CALR3Q96L12 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CALR3Q96L12 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CALR3Q96L12 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CALR3Q96L12 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 AC093827.2-201ENST00000512654 315 ntBASIC18.39■□□□□ 0.53
CALR3Q96L12 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.39■□□□□ 0.53
CALR3Q96L12 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.39■□□□□ 0.53
CALR3Q96L12 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.39■□□□□ 0.53
CALR3Q96L12 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.39■□□□□ 0.53
CALR3Q96L12 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.39■□□□□ 0.53
CALR3Q96L12 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.39■□□□□ 0.53
CALR3Q96L12 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CALR3Q96L12 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.38■□□□□ 0.53
CALR3Q96L12 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 FLJ38576-201ENST00000623820 2459 ntBASIC18.38■□□□□ 0.53
CALR3Q96L12 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CALR3Q96L12 FAM220CP-201ENST00000395253 831 ntBASIC18.38■□□□□ 0.53
CALR3Q96L12 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.38■□□□□ 0.53
CALR3Q96L12 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.38■□□□□ 0.53
CALR3Q96L12 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.38■□□□□ 0.53
CALR3Q96L12 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.38■□□□□ 0.53
CALR3Q96L12 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.38■□□□□ 0.53
CALR3Q96L12 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.38■□□□□ 0.53
CALR3Q96L12 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.38■□□□□ 0.53
CALR3Q96L12 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CALR3Q96L12 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CALR3Q96L12 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
CALR3Q96L12 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CALR3Q96L12 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CALR3Q96L12 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms