Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITCHQ96J02 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.58■□□□□ 0.25
ITCHQ96J02 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITCHQ96J02 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITCHQ96J02 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
ITCHQ96J02 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITCHQ96J02 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ITCHQ96J02 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.58■□□□□ 0.24
ITCHQ96J02 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.58■□□□□ 0.24
ITCHQ96J02 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.58■□□□□ 0.24
ITCHQ96J02 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
ITCHQ96J02 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.58■□□□□ 0.24
ITCHQ96J02 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.58■□□□□ 0.24
ITCHQ96J02 AC005332.3-201ENST00000589904 676 ntBASIC16.58■□□□□ 0.24
ITCHQ96J02 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.58■□□□□ 0.24
ITCHQ96J02 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.58■□□□□ 0.24
ITCHQ96J02 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.58■□□□□ 0.24
ITCHQ96J02 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 AC046185.3-201ENST00000623228 1824 ntBASIC16.58■□□□□ 0.24
ITCHQ96J02 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
ITCHQ96J02 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.58■□□□□ 0.24
ITCHQ96J02 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.58■□□□□ 0.24
ITCHQ96J02 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ITCHQ96J02 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
ITCHQ96J02 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ITCHQ96J02 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ITCHQ96J02 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.57■□□□□ 0.24
ITCHQ96J02 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ITCHQ96J02 AC010460.3-201ENST00000511359 1579 ntBASIC16.57■□□□□ 0.24
ITCHQ96J02 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.57■□□□□ 0.24
ITCHQ96J02 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 HBZP1-201ENST00000354915 429 ntBASIC16.57■□□□□ 0.24
ITCHQ96J02 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.57■□□□□ 0.24
ITCHQ96J02 AL137013.1-201ENST00000432946 1228 ntBASIC16.57■□□□□ 0.24
ITCHQ96J02 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.57■□□□□ 0.24
ITCHQ96J02 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.57■□□□□ 0.24
ITCHQ96J02 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.57■□□□□ 0.24
ITCHQ96J02 IGHV3-52-201ENST00000519770 353 ntBASIC16.57■□□□□ 0.24
ITCHQ96J02 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ITCHQ96J02 AL390719.2-201ENST00000606993 987 ntBASIC16.57■□□□□ 0.24
ITCHQ96J02 AC005363.2-201ENST00000618631 242 ntBASIC16.57■□□□□ 0.24
ITCHQ96J02 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ITCHQ96J02 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 PCDHB19P-201ENST00000570871 2371 ntBASIC16.57■□□□□ 0.24
ITCHQ96J02 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ITCHQ96J02 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.57■□□□□ 0.24
ITCHQ96J02 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.57■□□□□ 0.24
ITCHQ96J02 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ITCHQ96J02 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ITCHQ96J02 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ITCHQ96J02 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms