Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDCA5Q96FF9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDCA5Q96FF9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CDCA5Q96FF9 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 AC109635.5-201ENST00000533593 962 ntBASIC20.14■□□□□ 0.81
CDCA5Q96FF9 AC005412.3-201ENST00000580309 715 ntBASIC20.14■□□□□ 0.81
CDCA5Q96FF9 MIR4453-201ENST00000584019 89 ntBASIC20.14■□□□□ 0.81
CDCA5Q96FF9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 AC009118.2-201ENST00000613275 655 ntBASIC20.14■□□□□ 0.81
CDCA5Q96FF9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDCA5Q96FF9 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 AC012569.1-201ENST00000591191 1524 ntBASIC20.13■□□□□ 0.81
CDCA5Q96FF9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 AP000842.3-202ENST00000569238 1080 ntBASIC20.13■□□□□ 0.81
CDCA5Q96FF9 REXO1L9P-201ENST00000604264 2108 ntBASIC20.13■□□□□ 0.81
CDCA5Q96FF9 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDCA5Q96FF9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 WASH6P-202ENST00000359512 1437 ntBASIC20.12■□□□□ 0.81
CDCA5Q96FF9 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 AC008267.7-201ENST00000624570 1194 ntBASIC20.12■□□□□ 0.81
CDCA5Q96FF9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.12■□□□□ 0.81
CDCA5Q96FF9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDCA5Q96FF9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 AC100757.3-201ENST00000622361 1406 ntBASIC20.11■□□□□ 0.81
CDCA5Q96FF9 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 TSSK5P-201ENST00000423978 907 ntBASIC20.11■□□□□ 0.81
CDCA5Q96FF9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 AC027307.2-201ENST00000591252 911 ntBASIC20.11■□□□□ 0.81
CDCA5Q96FF9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 AL139327.4-201ENST00000612362 153 ntBASIC20.11■□□□□ 0.81
CDCA5Q96FF9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.11■□□□□ 0.81
CDCA5Q96FF9 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.1■□□□□ 0.81
CDCA5Q96FF9 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms