Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 KRT8P47-201ENST00000604727 1398 ntBASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 AC012317.2-201ENST00000623305 2251 ntBASIC17.26■□□□□ 0.35
SH3KBP1Q96B97 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 TP73-AS1-207ENST00000624167 988 ntBASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SH3KBP1Q96B97 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 HLA-A-201ENST00000376802 1334 ntBASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 AC009949.1-201ENST00000623048 1830 ntBASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SH3KBP1Q96B97 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 AL031284.1-201ENST00000419297 478 ntBASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 RNPS1P1-201ENST00000507437 918 ntBASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SH3KBP1Q96B97 AL139288.1-201ENST00000623748 933 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms