Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP2A3Q93084 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP2A3Q93084 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A3Q93084 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A3Q93084 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ATP2A3Q93084 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A3Q93084 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
ATP2A3Q93084 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ATP2A3Q93084 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A3Q93084 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP2A3Q93084 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ATP2A3Q93084 PMS2P7-201ENST00000506558 1336 ntBASIC18.33■□□□□ 0.53
ATP2A3Q93084 AC022898.2-201ENST00000616822 1312 ntBASIC18.33■□□□□ 0.53
ATP2A3Q93084 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.33■□□□□ 0.52
ATP2A3Q93084 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.33■□□□□ 0.52
ATP2A3Q93084 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 POLD2P1-201ENST00000511220 997 ntBASIC18.33■□□□□ 0.52
ATP2A3Q93084 NKAPP1-205ENST00000585790 367 ntBASIC18.33■□□□□ 0.52
ATP2A3Q93084 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 MTDHP4-201ENST00000600287 670 ntBASIC18.33■□□□□ 0.52
ATP2A3Q93084 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ATP2A3Q93084 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ATP2A3Q93084 AC093010.1-201ENST00000473625 1624 ntBASIC18.33■□□□□ 0.52
ATP2A3Q93084 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATP2A3Q93084 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 AC122714.2-201ENST00000502787 707 ntBASIC18.32■□□□□ 0.52
ATP2A3Q93084 IGHV3-22-201ENST00000520721 359 ntBASIC18.32■□□□□ 0.52
ATP2A3Q93084 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 AC145285.3-201ENST00000564603 959 ntBASIC18.32■□□□□ 0.52
ATP2A3Q93084 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 AC008735.5-201ENST00000623544 497 ntBASIC18.32■□□□□ 0.52
ATP2A3Q93084 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATP2A3Q93084 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.32■□□□□ 0.52
ATP2A3Q93084 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 MIR940-201ENST00000401276 94 ntBASIC18.31■□□□□ 0.52
ATP2A3Q93084 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 AC092910.1-201ENST00000482027 1129 ntBASIC18.31■□□□□ 0.52
ATP2A3Q93084 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ATP2A3Q93084 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.31■□□□□ 0.52
ATP2A3Q93084 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms