Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 AC097488.1-201ENST00000507834 756 ntBASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 RN7SL471P-201ENST00000580476 299 ntBASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SMIM4Q8WVI0 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 AP003041.3-201ENST00000527151 707 ntBASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 AC092850.2-201ENST00000623821 2697 ntBASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 AC068418.2-201ENST00000577309 3703 ntBASIC14.88□□□□□ -0.03
SMIM4Q8WVI0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 AC104640.1-201ENST00000562617 2109 ntBASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMIM4Q8WVI0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMIM4Q8WVI0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms