Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AP005018.1-201ENST00000525475 301 ntBASIC20.95■□□□□ 0.94
SNED1Q8TER0 SLC25A39P2-201ENST00000537614 270 ntBASIC20.95■□□□□ 0.94
SNED1Q8TER0 LINC02560-201ENST00000596379 459 ntBASIC20.95■□□□□ 0.94
SNED1Q8TER0 AL009183.1-201ENST00000603760 355 ntBASIC20.95■□□□□ 0.94
SNED1Q8TER0 AL390754.1-201ENST00000619088 582 ntBASIC20.95■□□□□ 0.94
SNED1Q8TER0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SNED1Q8TER0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNED1Q8TER0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNED1Q8TER0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 CRB3P1-201ENST00000449338 276 ntBASIC20.94■□□□□ 0.94
SNED1Q8TER0 PPP6R2P1-201ENST00000450880 1275 ntBASIC20.94■□□□□ 0.94
SNED1Q8TER0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 AC109635.5-201ENST00000533593 962 ntBASIC20.94■□□□□ 0.94
SNED1Q8TER0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.94■□□□□ 0.94
SNED1Q8TER0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNED1Q8TER0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNED1Q8TER0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.93■□□□□ 0.94
SNED1Q8TER0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNED1Q8TER0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNED1Q8TER0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNED1Q8TER0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNED1Q8TER0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNED1Q8TER0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNED1Q8TER0 KRT8P23-201ENST00000560090 1207 ntBASIC20.92■□□□□ 0.94
SNED1Q8TER0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.92■□□□□ 0.94
SNED1Q8TER0 GNAS-203ENST00000306120 1878 ntBASIC20.92■□□□□ 0.94
SNED1Q8TER0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNED1Q8TER0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNED1Q8TER0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNED1Q8TER0 BICD1-207ENST00000551848 1962 ntBASIC20.92■□□□□ 0.94
SNED1Q8TER0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNED1Q8TER0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNED1Q8TER0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNED1Q8TER0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNED1Q8TER0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNED1Q8TER0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNED1Q8TER0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.91■□□□□ 0.94
SNED1Q8TER0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms