Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 COX5BP2-201ENST00000392354 334 ntBASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 AC002558.1-201ENST00000488906 803 ntBASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 GUSBP12-201ENST00000513727 720 ntBASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 AC109462.3-201ENST00000573934 613 ntBASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 AL592071.1-201ENST00000611956 408 ntBASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 AC124864.1-201ENST00000623408 392 ntBASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLHC1Q8NHS4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.71■□□□□ 0.26
CLHC1Q8NHS4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
CLHC1Q8NHS4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.26
CLHC1Q8NHS4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 AC046185.3-201ENST00000623228 1824 ntBASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLHC1Q8NHS4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 TMPOP1-202ENST00000424642 1267 ntBASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 AC019129.2-201ENST00000609837 1235 ntBASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CLHC1Q8NHS4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms