Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 MIR5100-201ENST00000579544 119 ntBASIC16.8■□□□□ 0.28
KRT78Q8N1N4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 AC138894.3-201ENST00000603787 634 ntBASIC16.8■□□□□ 0.28
KRT78Q8N1N4 AL591684.3-201ENST00000605187 298 ntBASIC16.8■□□□□ 0.28
KRT78Q8N1N4 AC073592.5-201ENST00000624854 528 ntBASIC16.8■□□□□ 0.28
KRT78Q8N1N4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
KRT78Q8N1N4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 KLF4P1-201ENST00000412782 1185 ntBASIC16.79■□□□□ 0.28
KRT78Q8N1N4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 NUS1P1-201ENST00000446295 882 ntBASIC16.79■□□□□ 0.28
KRT78Q8N1N4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
KRT78Q8N1N4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 AL645608.8-201ENST00000606034 2086 ntBASIC16.78■□□□□ 0.28
KRT78Q8N1N4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
KRT78Q8N1N4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms