Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.17■□□□□ 0.18
COL27A1Q8IZC6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 AC092474.2-201ENST00000424288 719 ntBASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 AC109635.5-201ENST00000533593 962 ntBASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 ALG1L8P-201ENST00000533887 760 ntBASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 AC005225.4-201ENST00000557330 545 ntBASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 AL353732.1-201ENST00000569618 1459 ntBASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 AC012645.4-201ENST00000610691 1061 ntBASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL27A1Q8IZC6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 BICD1-207ENST00000551848 1962 ntBASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 AC012569.1-201ENST00000591191 1524 ntBASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 AC097493.3-201ENST00000509725 367 ntBASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 AC190387.1-201ENST00000551683 408 ntBASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 LINC02560-201ENST00000596379 459 ntBASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 UXT-AS1-201ENST00000590504 1525 ntBASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
COL27A1Q8IZC6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms