Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 TMEM191A-211ENST00000637163 1067 ntBASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 AC011270.2-201ENST00000624293 2550 ntBASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC170Q8IYT3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 SLC25A3P1-201ENST00000443844 931 ntBASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 AC092597.1-201ENST00000487352 616 ntBASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC170Q8IYT3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CCDC170Q8IYT3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 AC109462.3-201ENST00000573934 613 ntBASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 AC092068.3-201ENST00000587894 2016 ntBASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CCDC170Q8IYT3 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC170Q8IYT3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC170Q8IYT3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC170Q8IYT3 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC170Q8IYT3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC170Q8IYT3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms