Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 AC008764.6-201ENST00000595909 2069 ntBASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCN4BQ8IWT1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.33■□□□□ 0.53
SCN4BQ8IWT1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN4BQ8IWT1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.33■□□□□ 0.53
SCN4BQ8IWT1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN4BQ8IWT1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN4BQ8IWT1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN4BQ8IWT1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCN4BQ8IWT1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 AC009947.1-201ENST00000444350 727 ntBASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 AC140113.2-201ENST00000604370 208 ntBASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 AC027601.4-201ENST00000611259 610 ntBASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCN4BQ8IWT1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 MED15P5-201ENST00000423150 992 ntBASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 AC108751.1-201ENST00000490852 363 ntBASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.32■□□□□ 0.52
SCN4BQ8IWT1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 AC007967.2-201ENST00000432613 625 ntBASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 RPS15P9-201ENST00000494093 319 ntBASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 AL353135.1-201ENST00000606729 504 ntBASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 AL135999.2-201ENST00000622438 1686 ntBASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SCN4BQ8IWT1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN4BQ8IWT1 PMS2P7-201ENST00000506558 1336 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms