Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 AC211429.1-201ENST00000415277 523 ntBASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 Z83836.1-201ENST00000624605 1642 ntBASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC50Q8IVM0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 LINC01023-201ENST00000606054 436 ntBASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 AL390719.2-201ENST00000606993 987 ntBASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC50Q8IVM0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 RNF126P1-202ENST00000569893 925 ntBASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC50Q8IVM0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms