Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 PCED1CP-201ENST00000419887 785 ntBASIC16.09■□□□□ 0.17
VRK2Q86Y07 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 TSSC2-201ENST00000450217 709 ntBASIC16.09■□□□□ 0.17
VRK2Q86Y07 VENTXP7-201ENST00000475503 772 ntBASIC16.09■□□□□ 0.17
VRK2Q86Y07 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VRK2Q86Y07 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VRK2Q86Y07 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VRK2Q86Y07 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
VRK2Q86Y07 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.08■□□□□ 0.17
VRK2Q86Y07 AC106886.4-201ENST00000623557 2502 ntBASIC16.08■□□□□ 0.17
VRK2Q86Y07 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
VRK2Q86Y07 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
VRK2Q86Y07 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
VRK2Q86Y07 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.08■□□□□ 0.17
VRK2Q86Y07 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 AC092053.1-201ENST00000605787 1936 ntBASIC16.08■□□□□ 0.16
VRK2Q86Y07 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 AC009533.2-201ENST00000543664 586 ntBASIC16.08■□□□□ 0.16
VRK2Q86Y07 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 LINC02012-201ENST00000608206 1725 ntBASIC16.08■□□□□ 0.16
VRK2Q86Y07 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
VRK2Q86Y07 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
VRK2Q86Y07 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 AP002383.4-201ENST00000442518 975 ntBASIC16.07■□□□□ 0.16
VRK2Q86Y07 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 STK25P1-201ENST00000585406 838 ntBASIC16.07■□□□□ 0.16
VRK2Q86Y07 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 AC233702.3-201ENST00000578656 1387 ntBASIC16.07■□□□□ 0.16
VRK2Q86Y07 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms