Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.5□□□□□ -0.09
ZNF546Q86UE3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 AC046185.3-201ENST00000623228 1824 ntBASIC14.49□□□□□ -0.09
ZNF546Q86UE3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.49□□□□□ -0.09
ZNF546Q86UE3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.48□□□□□ -0.09
ZNF546Q86UE3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 KRT16P5-201ENST00000455284 522 ntBASIC14.48□□□□□ -0.09
ZNF546Q86UE3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.48□□□□□ -0.09
ZNF546Q86UE3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms