Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LDB1Q86U70 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.36■□□□□ 0.37
LDB1Q86U70 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 MYCLP1-201ENST00000372451 1075 ntBASIC17.36■□□□□ 0.37
LDB1Q86U70 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 SLC25A1P3-201ENST00000395415 828 ntBASIC17.36■□□□□ 0.37
LDB1Q86U70 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.36■□□□□ 0.37
LDB1Q86U70 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.36■□□□□ 0.37
LDB1Q86U70 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 AC114341.1-201ENST00000618070 349 ntBASIC17.36■□□□□ 0.37
LDB1Q86U70 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.36■□□□□ 0.37
LDB1Q86U70 AD001527.2-201ENST00000622994 785 ntBASIC17.36■□□□□ 0.37
LDB1Q86U70 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.36■□□□□ 0.37
LDB1Q86U70 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
LDB1Q86U70 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LDB1Q86U70 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.36■□□□□ 0.37
LDB1Q86U70 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LDB1Q86U70 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LDB1Q86U70 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LDB1Q86U70 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.35■□□□□ 0.37
LDB1Q86U70 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.35■□□□□ 0.37
LDB1Q86U70 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LDB1Q86U70 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 AC060834.1-201ENST00000443027 2032 ntBASIC17.35■□□□□ 0.37
LDB1Q86U70 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 AD000864.1-201ENST00000624076 2295 ntBASIC17.35■□□□□ 0.37
LDB1Q86U70 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.35■□□□□ 0.37
LDB1Q86U70 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.35■□□□□ 0.37
LDB1Q86U70 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.35■□□□□ 0.37
LDB1Q86U70 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
LDB1Q86U70 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.35■□□□□ 0.37
LDB1Q86U70 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.35■□□□□ 0.37
LDB1Q86U70 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.35■□□□□ 0.37
LDB1Q86U70 AC073592.5-201ENST00000624854 528 ntBASIC17.35■□□□□ 0.37
LDB1Q86U70 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.35■□□□□ 0.37
LDB1Q86U70 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.35■□□□□ 0.37
LDB1Q86U70 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LDB1Q86U70 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LDB1Q86U70 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LDB1Q86U70 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LDB1Q86U70 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LDB1Q86U70 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LDB1Q86U70 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.34■□□□□ 0.37
LDB1Q86U70 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.34■□□□□ 0.37
LDB1Q86U70 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.34■□□□□ 0.37
LDB1Q86U70 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LDB1Q86U70 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LDB1Q86U70 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.34■□□□□ 0.37
LDB1Q86U70 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LDB1Q86U70 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LDB1Q86U70 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.34■□□□□ 0.37
LDB1Q86U70 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LDB1Q86U70 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.34■□□□□ 0.37
LDB1Q86U70 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.34■□□□□ 0.37
LDB1Q86U70 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.34■□□□□ 0.37
LDB1Q86U70 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.34■□□□□ 0.37
LDB1Q86U70 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LDB1Q86U70 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LDB1Q86U70 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.34■□□□□ 0.37
LDB1Q86U70 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.34■□□□□ 0.37
LDB1Q86U70 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms