Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 POM121L3P-201ENST00000419331 1163 ntBASIC17.11■□□□□ 0.33
SYVN1Q86TM6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 AC106795.1-205ENST00000512851 1056 ntBASIC17.11■□□□□ 0.33
SYVN1Q86TM6 AP002469.2-201ENST00000531724 424 ntBASIC17.11■□□□□ 0.33
SYVN1Q86TM6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 NKILA-202ENST00000614771 2598 ntBASIC17.11■□□□□ 0.33
SYVN1Q86TM6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SYVN1Q86TM6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 AL121761.2-201ENST00000598007 1648 ntBASIC17.1■□□□□ 0.33
SYVN1Q86TM6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 NUS1P2-201ENST00000417358 873 ntBASIC17.1■□□□□ 0.33
SYVN1Q86TM6 AC096633.1-201ENST00000422446 749 ntBASIC17.1■□□□□ 0.33
SYVN1Q86TM6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SYVN1Q86TM6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 AC011676.5-201ENST00000624864 2660 ntBASIC17.09■□□□□ 0.33
SYVN1Q86TM6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 SAPCD2P3-201ENST00000455031 850 ntBASIC17.09■□□□□ 0.33
SYVN1Q86TM6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 AP005901.3-202ENST00000581653 237 ntBASIC17.09■□□□□ 0.33
SYVN1Q86TM6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 AC016396.2-201ENST00000562575 1417 ntBASIC17.09■□□□□ 0.33
SYVN1Q86TM6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms