Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDZRN4Q6ZMN7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDZRN4Q6ZMN7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PDZRN4Q6ZMN7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PDZRN4Q6ZMN7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 AC024243.1-201ENST00000609234 778 ntBASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PDZRN4Q6ZMN7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 AL603756.1-201ENST00000606511 2163 ntBASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 AL096828.2-201ENST00000567259 1965 ntBASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 HBZP1-201ENST00000354915 429 ntBASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.05■□□□□ 0.8
PDZRN4Q6ZMN7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PDZRN4Q6ZMN7 AL109659.2-201ENST00000606809 1674 ntBASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms