Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 GNAQP1-201ENST00000444815 1067 ntBASIC16.69■□□□□ 0.26
RIF1Q5UIP0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 AC093484.2-201ENST00000580996 2166 ntBASIC16.69■□□□□ 0.26
RIF1Q5UIP0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 SPDYE19P-201ENST00000338590 713 ntBASIC16.69■□□□□ 0.26
RIF1Q5UIP0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 AC107918.2-201ENST00000530817 355 ntBASIC16.69■□□□□ 0.26
RIF1Q5UIP0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RIF1Q5UIP0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 SLC25A6P2-201ENST00000497974 877 ntBASIC16.68■□□□□ 0.26
RIF1Q5UIP0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 TUBB1P2-201ENST00000422712 1306 ntBASIC16.68■□□□□ 0.26
RIF1Q5UIP0 TUBB1P1-201ENST00000503144 1300 ntBASIC16.68■□□□□ 0.26
RIF1Q5UIP0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AC087499.6-201ENST00000411576 835 ntBASIC16.68■□□□□ 0.26
RIF1Q5UIP0 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AL583810.1-201ENST00000553344 1045 ntBASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AC007967.4-201ENST00000614700 386 ntBASIC16.68■□□□□ 0.26
RIF1Q5UIP0 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.68■□□□□ 0.26
RIF1Q5UIP0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.67■□□□□ 0.26
RIF1Q5UIP0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms