Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 AC073592.4-201ENST00000623827 446 ntBASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 AD000864.1-201ENST00000624076 2295 ntBASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 AC079776.2-201ENST00000641154 1609 ntBASIC18.77■□□□□ 0.6
CBWD3Q5JTY5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBWD3Q5JTY5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CBWD3Q5JTY5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.77■□□□□ 0.59
CBWD3Q5JTY5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CBWD3Q5JTY5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 AC106795.1-205ENST00000512851 1056 ntBASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 PRELID1P1-202ENST00000567272 903 ntBASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 CLEC4GP1-201ENST00000596555 870 ntBASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CBWD3Q5JTY5 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 AL121772.3-201ENST00000610840 674 ntBASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 PRORSD1P-202ENST00000563365 2154 ntBASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.75■□□□□ 0.59
CBWD3Q5JTY5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.74■□□□□ 0.59
CBWD3Q5JTY5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms