Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MYCLP1-201ENST00000372451 1075 ntBASIC16.77■□□□□ 0.28
HMGCS1Q01581 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.77■□□□□ 0.28
HMGCS1Q01581 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.77■□□□□ 0.28
HMGCS1Q01581 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGCS1Q01581 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.77■□□□□ 0.28
HMGCS1Q01581 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.77■□□□□ 0.28
HMGCS1Q01581 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.77■□□□□ 0.28
HMGCS1Q01581 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.77■□□□□ 0.28
HMGCS1Q01581 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGCS1Q01581 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGCS1Q01581 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGCS1Q01581 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGCS1Q01581 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGCS1Q01581 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGCS1Q01581 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
HMGCS1Q01581 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
HMGCS1Q01581 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.77■□□□□ 0.27
HMGCS1Q01581 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.77■□□□□ 0.27
HMGCS1Q01581 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 AC092053.1-201ENST00000605787 1936 ntBASIC16.76■□□□□ 0.27
HMGCS1Q01581 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 AC122714.2-201ENST00000502787 707 ntBASIC16.76■□□□□ 0.27
HMGCS1Q01581 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 KRT8P10-201ENST00000450021 1447 ntBASIC16.76■□□□□ 0.27
HMGCS1Q01581 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
HMGCS1Q01581 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.76■□□□□ 0.27
HMGCS1Q01581 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 FAM220CP-201ENST00000395253 831 ntBASIC16.75■□□□□ 0.27
HMGCS1Q01581 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 BX276092.5-203ENST00000456199 560 ntBASIC16.75■□□□□ 0.27
HMGCS1Q01581 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HMGCS1Q01581 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.75■□□□□ 0.27
HMGCS1Q01581 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms