Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 MIR935-201ENST00000401179 91 ntBASIC12.25□□□□□ -0.45
CKS1BP61024 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.25□□□□□ -0.45
CKS1BP61024 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 KRT18P41-201ENST00000518924 1277 ntBASIC12.25□□□□□ -0.45
CKS1BP61024 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 CKBP1-201ENST00000565489 1086 ntBASIC12.25□□□□□ -0.45
CKS1BP61024 AC026271.3-201ENST00000571884 352 ntBASIC12.25□□□□□ -0.45
CKS1BP61024 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CKS1BP61024 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CKS1BP61024 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CKS1BP61024 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.25□□□□□ -0.45
CKS1BP61024 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CKS1BP61024 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CKS1BP61024 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.24□□□□□ -0.45
CKS1BP61024 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CKS1BP61024 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.24□□□□□ -0.45
CKS1BP61024 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CKS1BP61024 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC12.24□□□□□ -0.45
CKS1BP61024 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CKS1BP61024 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.24□□□□□ -0.45
CKS1BP61024 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CKS1BP61024 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.24□□□□□ -0.45
CKS1BP61024 AL096828.2-201ENST00000567259 1965 ntBASIC12.24□□□□□ -0.45
CKS1BP61024 AL161772.1-201ENST00000610494 4412 ntBASIC12.24□□□□□ -0.45
CKS1BP61024 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CKS1BP61024 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.24□□□□□ -0.45
CKS1BP61024 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CKS1BP61024 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CKS1BP61024 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CKS1BP61024 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CKS1BP61024 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.23□□□□□ -0.45
CKS1BP61024 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.23□□□□□ -0.45
CKS1BP61024 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CKS1BP61024 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 AC034236.2-201ENST00000606662 1610 ntBASIC12.23□□□□□ -0.45
CKS1BP61024 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CKS1BP61024 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.23□□□□□ -0.45
CKS1BP61024 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CKS1BP61024 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms