Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP4BP1P59074 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHMP4BP1P59074 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 IGHV3-22-201ENST00000520721 359 ntBASIC19.88■□□□□ 0.77
CHMP4BP1P59074 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHMP4BP1P59074 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 AC027601.4-201ENST00000611259 610 ntBASIC19.87■□□□□ 0.77
CHMP4BP1P59074 AL139288.1-201ENST00000623748 933 ntBASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHMP4BP1P59074 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 AC007967.2-201ENST00000432613 625 ntBASIC19.86■□□□□ 0.77
CHMP4BP1P59074 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHMP4BP1P59074 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms