Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SMIM11AP58511 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.05■□□□□ 0.16
SMIM11AP58511 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SMIM11AP58511 ATP5G1P1-201ENST00000448724 379 ntBASIC16.05■□□□□ 0.16
SMIM11AP58511 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
SMIM11AP58511 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 AC046185.3-201ENST00000623228 1824 ntBASIC16.05■□□□□ 0.16
SMIM11AP58511 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.05■□□□□ 0.16
SMIM11AP58511 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SMIM11AP58511 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SMIM11AP58511 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.04■□□□□ 0.16
SMIM11AP58511 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.04■□□□□ 0.16
SMIM11AP58511 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 TNRC18P3-201ENST00000441896 2691 ntBASIC16.04■□□□□ 0.16
SMIM11AP58511 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SMIM11AP58511 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.04■□□□□ 0.16
SMIM11AP58511 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
SMIM11AP58511 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SMIM11AP58511 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.04■□□□□ 0.16
SMIM11AP58511 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.04■□□□□ 0.16
SMIM11AP58511 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.04■□□□□ 0.16
SMIM11AP58511 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.04■□□□□ 0.16
SMIM11AP58511 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.04■□□□□ 0.16
SMIM11AP58511 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SMIM11AP58511 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SMIM11AP58511 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SMIM11AP58511 PCDHA14-201ENST00000506751 2298 ntBASIC16.03■□□□□ 0.16
SMIM11AP58511 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.03■□□□□ 0.16
SMIM11AP58511 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SMIM11AP58511 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.03■□□□□ 0.16
SMIM11AP58511 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.03■□□□□ 0.16
SMIM11AP58511 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SMIM11AP58511 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.03■□□□□ 0.16
SMIM11AP58511 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 AC005915.1-201ENST00000624912 2018 ntBASIC16.03■□□□□ 0.16
SMIM11AP58511 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 MIR662-201ENST00000384847 95 ntBASIC16.03■□□□□ 0.16
SMIM11AP58511 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SMIM11AP58511 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.03■□□□□ 0.16
SMIM11AP58511 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.03■□□□□ 0.16
SMIM11AP58511 AC124947.2-201ENST00000547118 1133 ntBASIC16.03■□□□□ 0.16
SMIM11AP58511 AC145285.6-201ENST00000604632 637 ntBASIC16.03■□□□□ 0.16
SMIM11AP58511 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.03■□□□□ 0.16
SMIM11AP58511 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SMIM11AP58511 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.03■□□□□ 0.16
SMIM11AP58511 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.03■□□□□ 0.16
SMIM11AP58511 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SMIM11AP58511 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SMIM11AP58511 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SMIM11AP58511 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.03■□□□□ 0.16
SMIM11AP58511 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.02■□□□□ 0.16
SMIM11AP58511 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMIM11AP58511 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SMIM11AP58511 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
SMIM11AP58511 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SMIM11AP58511 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms