Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.33■□□□□ 0.21
RAB38P57729 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAB38P57729 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RAB38P57729 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RAB38P57729 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.33■□□□□ 0.21
RAB38P57729 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB38P57729 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
RAB38P57729 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB38P57729 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB38P57729 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB38P57729 LAGE3P1-201ENST00000425356 484 ntBASIC16.33■□□□□ 0.2
RAB38P57729 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RAB38P57729 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB38P57729 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB38P57729 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB38P57729 OR7E14P-202ENST00000530490 1290 ntBASIC16.33■□□□□ 0.2
RAB38P57729 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.33■□□□□ 0.2
RAB38P57729 AC107918.4-202ENST00000641623 219 ntBASIC16.33■□□□□ 0.2
RAB38P57729 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB38P57729 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB38P57729 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB38P57729 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB38P57729 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RAB38P57729 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RAB38P57729 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB38P57729 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.33■□□□□ 0.2
RAB38P57729 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB38P57729 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB38P57729 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.33■□□□□ 0.2
RAB38P57729 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RAB38P57729 AC141586.5-201ENST00000624546 2050 ntBASIC16.33■□□□□ 0.2
RAB38P57729 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RAB38P57729 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
RAB38P57729 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RAB38P57729 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB38P57729 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RAB38P57729 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB38P57729 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.32■□□□□ 0.2
RAB38P57729 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB38P57729 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB38P57729 RPS2P1-201ENST00000434010 821 ntBASIC16.32■□□□□ 0.2
RAB38P57729 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.32■□□□□ 0.2
RAB38P57729 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB38P57729 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.32■□□□□ 0.2
RAB38P57729 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.32■□□□□ 0.2
RAB38P57729 AL139424.1-201ENST00000607572 797 ntBASIC16.32■□□□□ 0.2
RAB38P57729 AL773604.1-201ENST00000617417 272 ntBASIC16.32■□□□□ 0.2
RAB38P57729 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RAB38P57729 AC116353.5-201ENST00000638148 1699 ntBASIC16.32■□□□□ 0.2
RAB38P57729 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RAB38P57729 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB38P57729 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB38P57729 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB38P57729 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB38P57729 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RAB38P57729 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB38P57729 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.31■□□□□ 0.2
RAB38P57729 AL662844.1-201ENST00000546340 181 ntBASIC16.31■□□□□ 0.2
RAB38P57729 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.31■□□□□ 0.2
RAB38P57729 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RAB38P57729 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.31■□□□□ 0.2
RAB38P57729 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 AL353135.1-201ENST00000606729 504 ntBASIC16.31■□□□□ 0.2
RAB38P57729 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.31■□□□□ 0.2
RAB38P57729 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RAB38P57729 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.31■□□□□ 0.2
RAB38P57729 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RAB38P57729 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms