Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.45■□□□□ 0.22
WNT3P56703 AL353593.2-201ENST00000602529 1483 ntBASIC16.45■□□□□ 0.22
WNT3P56703 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
WNT3P56703 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.45■□□□□ 0.22
WNT3P56703 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.45■□□□□ 0.22
WNT3P56703 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.45■□□□□ 0.22
WNT3P56703 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
WNT3P56703 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
WNT3P56703 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3P56703 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
WNT3P56703 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
WNT3P56703 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3P56703 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
WNT3P56703 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
WNT3P56703 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.44■□□□□ 0.22
WNT3P56703 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.44■□□□□ 0.22
WNT3P56703 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 MIR3652-201ENST00000579335 131 ntBASIC16.44■□□□□ 0.22
WNT3P56703 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.44■□□□□ 0.22
WNT3P56703 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
WNT3P56703 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3P56703 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
WNT3P56703 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.44■□□□□ 0.22
WNT3P56703 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.44■□□□□ 0.22
WNT3P56703 KRT18P1-202ENST00000452408 1331 ntBASIC16.44■□□□□ 0.22
WNT3P56703 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
WNT3P56703 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3P56703 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3P56703 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
WNT3P56703 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
WNT3P56703 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
WNT3P56703 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
WNT3P56703 CHCHD2P8-201ENST00000429873 447 ntBASIC16.43■□□□□ 0.22
WNT3P56703 AC246785.2-201ENST00000432512 513 ntBASIC16.43■□□□□ 0.22
WNT3P56703 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.43■□□□□ 0.22
WNT3P56703 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3P56703 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.43■□□□□ 0.22
WNT3P56703 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.43■□□□□ 0.22
WNT3P56703 PRELID1P1-202ENST00000567272 903 ntBASIC16.43■□□□□ 0.22
WNT3P56703 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.43■□□□□ 0.22
WNT3P56703 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.43■□□□□ 0.22
WNT3P56703 AP005901.3-202ENST00000581653 237 ntBASIC16.43■□□□□ 0.22
WNT3P56703 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
WNT3P56703 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3P56703 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.43■□□□□ 0.22
WNT3P56703 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
WNT3P56703 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
WNT3P56703 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.43■□□□□ 0.22
WNT3P56703 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
WNT3P56703 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
WNT3P56703 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
WNT3P56703 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms