Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3BGRP55822 AC087499.1-201ENST00000418141 1075 ntBASIC16.66■□□□□ 0.26
SH3BGRP55822 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3BGRP55822 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3BGRP55822 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.66■□□□□ 0.26
SH3BGRP55822 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SH3BGRP55822 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3BGRP55822 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.66■□□□□ 0.26
SH3BGRP55822 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3BGRP55822 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.66■□□□□ 0.26
SH3BGRP55822 AC093010.1-201ENST00000473625 1624 ntBASIC16.66■□□□□ 0.26
SH3BGRP55822 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SH3BGRP55822 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.66■□□□□ 0.26
SH3BGRP55822 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SH3BGRP55822 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.65■□□□□ 0.26
SH3BGRP55822 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SH3BGRP55822 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 KRT8P3-201ENST00000519669 1449 ntBASIC16.65■□□□□ 0.26
SH3BGRP55822 AC112777.1-201ENST00000540175 1423 ntBASIC16.65■□□□□ 0.26
SH3BGRP55822 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.65■□□□□ 0.26
SH3BGRP55822 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.65■□□□□ 0.26
SH3BGRP55822 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.65■□□□□ 0.26
SH3BGRP55822 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SH3BGRP55822 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SH3BGRP55822 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SH3BGRP55822 LYSMD4-203ENST00000378904 2122 ntBASIC16.64■□□□□ 0.25
SH3BGRP55822 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SH3BGRP55822 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.64■□□□□ 0.25
SH3BGRP55822 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SH3BGRP55822 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.64■□□□□ 0.25
SH3BGRP55822 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.64■□□□□ 0.25
SH3BGRP55822 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SH3BGRP55822 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.64■□□□□ 0.25
SH3BGRP55822 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.64■□□□□ 0.25
SH3BGRP55822 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.64■□□□□ 0.25
SH3BGRP55822 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.64■□□□□ 0.25
SH3BGRP55822 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.64■□□□□ 0.25
SH3BGRP55822 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SH3BGRP55822 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.64■□□□□ 0.25
SH3BGRP55822 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms