Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.54■□□□□ 0.56
CDH8P55286 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.54■□□□□ 0.56
CDH8P55286 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDH8P55286 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDH8P55286 FAM215A-202ENST00000632077 792 ntBASIC18.54■□□□□ 0.56
CDH8P55286 AC107918.4-202ENST00000641623 219 ntBASIC18.54■□□□□ 0.56
CDH8P55286 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH8P55286 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH8P55286 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH8P55286 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH8P55286 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDH8P55286 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.53■□□□□ 0.56
CDH8P55286 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.53■□□□□ 0.56
CDH8P55286 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.53■□□□□ 0.56
CDH8P55286 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CDH8P55286 AC079776.4-201ENST00000511039 504 ntBASIC18.53■□□□□ 0.56
CDH8P55286 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.53■□□□□ 0.56
CDH8P55286 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.53■□□□□ 0.56
CDH8P55286 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.53■□□□□ 0.56
CDH8P55286 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDH8P55286 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDH8P55286 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDH8P55286 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDH8P55286 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDH8P55286 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDH8P55286 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CDH8P55286 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH8P55286 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH8P55286 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 AL662844.1-201ENST00000546340 181 ntBASIC18.52■□□□□ 0.56
CDH8P55286 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.52■□□□□ 0.56
CDH8P55286 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH8P55286 MIR7706-201ENST00000613747 67 ntBASIC18.52■□□□□ 0.56
CDH8P55286 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH8P55286 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDH8P55286 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH8P55286 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH8P55286 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH8P55286 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH8P55286 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH8P55286 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
CDH8P55286 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CDH8P55286 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH8P55286 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CDH8P55286 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH8P55286 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH8P55286 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH8P55286 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDH8P55286 AL645608.8-201ENST00000606034 2086 ntBASIC18.51■□□□□ 0.55
CDH8P55286 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH8P55286 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CDH8P55286 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH8P55286 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH8P55286 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDH8P55286 AC139887.3-201ENST00000568585 713 ntBASIC18.51■□□□□ 0.55
CDH8P55286 AP001005.1-201ENST00000571755 1248 ntBASIC18.51■□□□□ 0.55
CDH8P55286 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH8P55286 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH8P55286 AL589182.2-201ENST00000619332 1049 ntBASIC18.51■□□□□ 0.55
CDH8P55286 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH8P55286 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH8P55286 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
CDH8P55286 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH8P55286 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDH8P55286 NCF1C-201ENST00000438382 1427 ntBASIC18.5■□□□□ 0.55
CDH8P55286 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms